rs16893490 chr8:120063893 C>T
- Sequence
tccttcttaagacacccatagggc[C/T]ggactgacatctggtggaggacag
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM19240 (B cells Lymphoblastoid Cell Lines) GM19193 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -1.40 | 1.75 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | -1.31 | 1.50 | 1.38 | 0.30 | Weak Concordant |
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Motif analysis
