rs16910259 chr12:14771094 A>G
- Sequence
acctcgcccagacattctgaaatc[A/G]cagcgcctactcagcagaaaatcg
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) CD14+ monocytes Th2-cells
- ASB for transcription factors
- TYY1_HUMAN STAT1_HUMAN MAF_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | -0.05 | 1.53 | 1.58 | n/a | No Hit | |||
| STAT1_HUMAN | 3.27 | n/a | 2.00 | n/a | No Hit | |||
| MAF_HUMAN | 3.26 | n/a | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.64 | 0.15 | 1.42 | n/a | No Hit | |||
| RFOX2_HUMAN | 2.03 | -1.26 | 1.25 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cortex, Brain_Hypothalamus, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Vagina