rs16914121 chr9:98234706 G>A

Sequence
catccatcctgtctcccagtggtc[G/A]tcatgcggcgcacatctcctgcct
ASB in cell types
Peyer's patch
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.71 -1.07 2.2·10-31.00 1.00 0.30 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  aortic valve calcium,  salmonella-induced pyroptosis
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Colon_Sigmoid,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Nerve_Tibial,  Thyroid,  Whole_Blood

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