rs16916157 chr9:3239284 C>A
- Sequence
taacaacattccatttggtaaaac[C/A]ttgtgttccttggttacttttctt
- ASB in cell types
- VCaP (prostate carcinoma) LHSAR (prostate epithelial cells) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN MBL2_HUMAN BCOR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.88 | 1.90 | 1.57 | 5.67 | Concordant | |||
| FOXA1_HUMAN | -0.31 | 1.69 | 1.58 | n/a | No Hit | |||
| MBL2_HUMAN | n/a | 3.07 | 1.00 | n/a | n/a | |||
| BCOR_HUMAN | -2.11 | 2.60 | 1.00 | n/a | n/a |
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Motif analysis
