rs16916456 chr9:111910585 C>T
- Sequence
atgtcagtgattgtaactgtcatt[C/T]ctagaacttgtgtggttcttttca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CAR-T cells
- ASB for transcription factors
- MTA2_HUMAN IKZF2_HUMAN ELF1_HUMAN IRF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | -2.66 | 2.66 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | -2.20 | 2.31 | 1.00 | n/a | n/a | |||
| ELF1_HUMAN | n/a | 3.69 | 1.00 | n/a | No Hit | |||
| IRF4_HUMAN | -0.29 | 2.40 | 1.00 | 2.46 | Concordant | |||
| ARI3A_HUMAN | -3.31 | 3.56 | 1.00 | n/a | n/a |
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Motif analysis
