ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs16928207
chr12:24937702
T
>
A
Sequence
ccccaccgggttgaggagttttta[T/A]agcaggtgactgatgtgatcactc
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
GLIS1_HUMAN
ZN366_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN
1.56
-0.15
0.02
0.91
2.00
n/a
No Hit
ZN366_HUMAN
2.84
-5.17
0.02
1.00
2.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
fasting insulin
,
ldl cholesterol
,
mitral annular calcium
,
total cholesterol
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Cells_Cultured_fibroblasts
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)