rs16931415 chr12:26870871 T>C

Sequence
ctggcaagacttgggctccaggaa[T/C]tgaaaggtgagcagtctttggttg
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
FEZF1_HUMAN NOTC1_HUMAN SUH_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FEZF1_HUMAN n/a 3.33 1.002.9·10-5 2.00 n/a No Hit
NOTC1_HUMAN 1.79 n/a 5.1·10-41.00 2.50 n/a n/a
SUH_HUMAN 1.87 n/a 0.021.00 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol ldl cholesterol parkinsons disease total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts Thyroid

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