rs16935013 chr12:11580251 T>C

Sequence
ctcctttttagggattaaaccatc[T/C]cagaatgcatttgactcacttcag
ASB in cell types
GM19239 (male B-cells lymphoblastoid cell line) GM18486 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.15 -0.18 4.4·10-31.00 1.28 n/a No Hit
STAG1_HUMAN 1.58 -0.09 7.8·10-30.99 1.20 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum Artery_Tibial

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