rs16935797 chr11:8099753 T>C

Sequence
aaggtatgtgtgagaatttcagaa[T/C]ggcagggagggcgtcactgaggta
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.82 0.52 0.030.96 1.36 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP eye color,  hdl cholesterol change with statins,  obesity with early age of onset (age >2),  total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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