rs16942751 chr18:26813249 C>A

Sequence
agccattaggtggtgctgcctaac[C/A]aacattcccttccctgttaggtca
ASB in cell types
heart left ventricle adrenal gland pancreas esophagus squamous epithelium
ASB for transcription factors
CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN CHD8_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.54 -0.45 7.9·10-591.00 1.29 n/a No Hit
RAD21_HUMAN 2.72 -2.81 3.1·10-101.00 2.30 n/a n/a
STAG1_HUMAN 2.37 -2.45 3.1·10-51.00 1.25 n/a n/a
CHD8_HUMAN 2.38 n/a 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI chronic kidney disease,  creatinine levels,  estimated glomerular filtration rate,  glomerular filtration rate
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  chronic kidney disease,  serum creatinine
GTEx eQTL Nerve_Tibial

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