rs16945824 chr16:48117578 T>C
- Sequence
aatggccccttccctggcagggtt[T/C]tcgccaagcagggaagaagacaac
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines) 2588 (Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines) GM19193 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.98 | n/a | 2.90 | n/a | No Hit | |||
| STAG1_HUMAN | 1.78 | n/a | 2.88 | n/a | n/a |
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