rs16955490 chr18:9743638 G>A
- Sequence
gccccagggcttcaggggatctgc[G/A]ttctcaggccacatgcaaaaccag
- ASB in cell types
- MCF10A (breast epithelial cells) CD14+ monocytes HUVEC-C (HUVEC, umbilical vein endothelial cells) monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- TEAD4_HUMAN STAT1_HUMAN SMAD3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TEAD4_HUMAN | -2.46 | 2.73 | 1.00 | n/a | No Hit | |||
| STAT1_HUMAN | 1.70 | 0.56 | 2.00 | n/a | No Hit | |||
| SMAD3_HUMAN | 0.04 | 2.52 | 2.00 | n/a | No Hit |
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