ADASTRA v6.1.0
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rs16970742
chr19:35882465
C
>
T
Sequence
cacctggtagatgttaggagaaga[C/T]gcttcatggtgcaagttggatgca
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM18486 (Lymphoblastoid Cell Lines)
-0.48
0.77
1.00
6.6·10
-3
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
refractive error
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Lung
,
Nerve_Tibial
,
Pancreas
,
Skin_Not_Sun_Exposed_Suprapubic
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
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