rs16971667 chr16:19167821 C>G
- Sequence
gtggcgctgccgggccgccccgcg[C/G]tagacctgttgcgtccagggcgca
- ASB in cell types
- HCT-116 (colon carcinoma) KMS-11 (Plasma cell myeloma) SMMC-7721 (hepatocellular carcinoma) CD14+ monocytes
- ASB for transcription factors
- CATA_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CATA_HUMAN | -5.64 | 3.30 | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | 2.58 | -1.59 | 2.00 | n/a | No Hit |
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