rs16984980 chr20:59032394 C>A
- Sequence
ggacctgccaatcaccgcctccta[C/A]ccggccccgcccctgagcacggcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma) adult erythroblasts monocytes from periferal blood
- ASB for transcription factors
- RB_HUMAN ANDR_HUMAN SRBP2_HUMAN SUH_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RB_HUMAN | 3.32 | n/a | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.70 | -0.39 | 2.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.06 | n/a | 2.50 | n/a | No Hit | |||
| SUH_HUMAN | 1.61 | -0.33 | 1.33 | n/a | No Hit |
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