rs16985662 chr22:38230272 A>G
- Sequence
aaccaggaaatgcagggagagacg[A/G]agagacggcagaggcctgttctgg
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines) foreskin keratinocyte LNCaP (prostate carcinoma)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN ANDR_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 2.14 | 2.23 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 2.13 | 1.37 | 1.43 | n/a | No Hit | |||
| ANDR_HUMAN | 2.66 | -1.87 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.41 | n/a | 2.00 | n/a | No Hit | |||
| STAG2_HUMAN | -0.12 | 1.80 | 1.00 | n/a | n/a |
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