rs16994549 chr20:1503736 T>C
- Sequence
tctgggaatgcacccttttgggac[T/C]tagtgtgtaatcacgtaacggaag
- ASB in cell types
- erythroid cells CD14+ monocytes HUVEC-C (HUVEC, umbilical vein endothelial cells) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- SMC1A_HUMAN FOXK2_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC1A_HUMAN | -0.52 | 1.64 | 1.00 | n/a | n/a | |||
| FOXK2_HUMAN | 2.23 | -4.15 | 1.50 | n/a | No Hit | |||
| STAT1_HUMAN | 1.42 | -0.40 | 2.33 | n/a | No Hit |
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