rs16994705 chr4:38675674 T>A
- Sequence
ccgaggttggccaactggattgat[T/A]tactgccggtgtcctggtctctaa
- ASB in cell types
- 22RV1 (prostate carcinoma) neutrophils from periferal blood D54 (H54, Human glioblastoma) foreskin keratinocyte
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.51 | 0.64 | 1.57 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, body mass index (bmi), diastolic blood pressure (dbp), hdl cholesterol, height, microalbuminuria, systolic blood pressure (sbp)
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Thyroid, Uterus, Vagina, Whole_Blood