rs17001607 chr22:50542624 A>T

Sequence
taatgactgggcatcattcatggg[A/T]aactgcactgcgtaagcaggcctg
ASB in cell types
monocytes from periferal blood primary B-CLL cells
ASB for transcription factors
SRBP2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN 2.75 n/a 0.021.00 4.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  cystatin c in serum,  height,  homa-ir,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Coronary,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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