rs17018013 chr2:3780915 T>C
- Sequence
ttgctggttatttatatataactt[T/C]ccggaagaggtatttcctgtatca
- ASB in cell types
- GM19099 (female B-cells Lymphoblastoid Cell Lines) foreskin keratinocyte GSC23 (Glioblastoma) GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.24 | 0.42 | 1.52 | n/a | No Hit | |||
| STAG1_HUMAN | 1.93 | -0.09 | 1.33 | n/a | n/a |
Items per page:
1 – 2 of 2