rs17020833 chr1:108063953 C>T

Sequence
gtgattgaatgtgacaggaagtga[C/T]gatgtcattttggagcctgtaata
ASB in cell types
macrophages form periferal blood
ASB for transcription factors
SPI1_HUMAN CREB1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.20 0.75 2.1·10-41.00 1.60 -0.33 Weak Concordant
CREB1_HUMAN 0.09 2.71 1.002.8·10-3 2.83 1.21 Weak Concordant
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Motif analysis

CREB1_HUMAN Weak Concordant
CREB1_HUMAN pic

Genetic associations

GRASP refractive error
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Lung Whole_Blood

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