rs17023022 chr3:85567277 C>T
- Sequence
atggttaatagcgccccctgtagg[C/T]gagcaatgtacaacatacaaacca
- ASB in cell types
- foreskin keratinocyte GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.13 | 0.53 | 1.46 | -0.77 | Weak Concordant |
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Motif analysis
