rs17023899 chr2:39523888 T>G

Sequence
gacacaatgtactccttaggtaat[T/G]tgatccatctcagtaaaatctgcc
ASB in cell types
BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN FOS_HUMAN TCF21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 1.23 0.77 1.6·10-51.00 1.08 n/a No Hit
FOS_HUMAN 3.09 -3.23 5.7·10-41.00 1.00 n/a No Hit
TCF21_HUMAN 1.44 n/a 0.041.00 2.50 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus

Download