rs17025956 chr2:101692288 G>A
- Sequence
ttttgatctgtttctgcatcccac[G/A]ccttccatcctgttgtgcactaga
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN FLI1_HUMAN ETS1_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.28 | -0.21 | 1.00 | n/a | No Hit | |||
| FLI1_HUMAN | 2.14 | -0.81 | 1.00 | -0.12 | Weak Concordant | |||
| ETS1_HUMAN | 2.08 | -0.70 | 1.00 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.84 | 0.46 | 1.00 | n/a | n/a |
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Motif analysis
