rs170287 chr20:33076962 T>G
- Sequence
tggcaccaccttcatgtgtgcacc[T/G]ccctctacagtttatagtgtgcat
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) epithelial cell of prostate
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.92 | 3.15 | 1.89 | 2.61 | Concordant |
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Motif analysis
