rs17033814 chr2:67572891 G>C

Sequence
aggacctgagttcatgaatatctg[G/C]gctagctcagtgaagctaaggagg
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.97 n/a 5.1·10-41.00 2.00 2.83 Discordant
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Motif analysis

ANDR_HUMAN Discordant
ANDR_HUMAN pic

Genetic associations

GRASP birth weight,  major depressive disorder (broad definition),  major depressive disorder (broad definition) (females),  major depressive disorder (broad definition) (males),  triglycerides change with statins
GTEx eQTL Brain_Cerebellum

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