rs17035893 chr4:105594324 T>A
- Sequence
tctttcctgttctcacttcccttc[T/A]ggacatttaactaccagtgtcttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ELF1_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | 2.01 | -1.75 | 1.00 | -1.09 | Weak Concordant | |||
| COT1_HUMAN | 1.61 | -1.40 | 1.00 | n/a | No Hit |
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Motif analysis
