rs17037526 chr1:11899305 C>T
- Sequence
ctctgagcaggcatcacaggctgg[C/T]ccatcggatcattatttgtacttt
- ASB in cell types
- CRC107 (colorectal cancer metastatic stem cells)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| CRC107 (colorectal cancer metastatic stem cells) | 1.31 | -1.11 | 1.33 |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, cystatin c in serum, diabetic retinopathy in type 2 diabetes mellitus
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Spleen, Testis, Thyroid, Whole_Blood