ADASTRA v6.1.0
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rs17038414
chr12:106386410
T
>
C
Sequence
catctccagcagagggcagtatgt[T/C]cccatgcatccaaaggactttttt
ASB in cell types
2588 (Lymphoblastoid Cell Lines)
GM18505 (female B-cells Lymphoblastoid Cell Lines)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
2588 (Lymphoblastoid Cell Lines)
-0.28
0.67
1.00
7.3·10
-3
1.00
GM18505 (female B-cells Lymphoblastoid Cell Lines)
-0.58
0.57
1.00
0.03
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
rheumatoid arthritis
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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