rs17040215 chr12:108063433 G>T
- Sequence
tttaaacagaaaaagtgtgcagct[G/T]ttacaagtaaccataaaggtgttt
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi) HeLa S3 (cervical adenocarcinoma) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.44 | 0.39 | 1.55 | n/a | No Hit | |||
| STAG1_HUMAN | 1.05 | -0.74 | 1.11 | n/a | n/a |
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