rs17042034 chr1:212285673 G>T
- Sequence
tgagaggaggctccaggcagggcg[G/T]gctgcgctggcagcggccgctgag
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) bipolar neuron
- ASB for transcription factors
- ZBT26_HUMAN TYY1_HUMAN EZH2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT26_HUMAN | n/a | 1.07 | 2.00 | n/a | No Hit | |||
| TYY1_HUMAN | -0.33 | 1.32 | 1.67 | n/a | No Hit | |||
| EZH2_HUMAN | 2.15 | -1.95 | 1.00 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Brain_Substantia_nigra, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Ovary, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood