rs17051843 chr5:168317645 A>G
- Sequence
atatacagctattgagaaatgtga[A/G]cacagaggccttttcagagagaaa
- ASB in cell types
- A549 (lung carcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN JUN_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.05 | -0.26 | 1.71 | -3.23 | Concordant | |||
| JUN_HUMAN | 1.30 | 0.02 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 1.39 | 0.61 | 2.10 | n/a | n/a |
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Motif analysis
