rs17054397 chr5:157253866 A>G

Sequence
catgagagtgcctactctggcttg[A/G]gcacttctatatgcaaggtgaata
ASB in cell types
VCaP (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
VCaP (prostate carcinoma) 1.77 -2.94 6.3·10-31.00 1.50
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellum,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg

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