rs17057546 chr18:75639434 G>A
- Sequence
gaaacctagaagctgcctggttgc[G/A]aaacactcaccaaagtggaaccat
- ASB in cell types
- SUM159PT (Triple negative breast cancer) MOLM-13(acute monocytic leukemia(AML), Homo sapiens)
- ASB for transcription factors
- CEBPB_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 2.66 | -1.98 | 1.00 | -0.61 | Weak Concordant | |||
| CEBPA_HUMAN | 1.86 | -3.35 | 1.50 | -0.24 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP birth weight, ldl cholesterol change with statins, simpson-angus scale, total cholesterol change with statins