rs17065381 chr6:104897150 T>C
- Sequence
acaaccactagatgtcagcactta[T/C]gaattgtaatccagccaaatgctc
- ASB in cell types
- Kelly (neuroblastoma) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.04 | 1.27 | 1.15 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, fasting insulin, height, homa-ir, resistance to kuru in aged women despite likely exposure, rheumatoid arthritis, triglycerides, waist hip ratio