rs17070094 chr3:64187352 A>C
- Sequence
gttcatgtgactagcttcccaaga[A/C]gagtgaggtggactgctctgaagc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- FOXA1_HUMAN SUH_HUMAN NOTC1_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.13 | 1.61 | 2.64 | n/a | No Hit | |||
| SUH_HUMAN | 1.85 | n/a | 2.50 | n/a | No Hit | |||
| NOTC1_HUMAN | 1.36 | n/a | 2.50 | n/a | n/a | |||
| TCF21_HUMAN | 1.81 | -3.60 | 1.50 | n/a | No Hit | |||
| NFXL1_HUMAN | n/a | 2.76 | 2.00 | n/a | n/a |
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