rs17071829 chr4:181549447 A>T
- Sequence
ataaggtttctggtggggcttacc[A/T]gtatggaccagagcctgcatgaag
- ASB in cell types
- SUM159PT (Triple negative breast cancer) MDA-MB-231 (breast adenocarcinoma)
- ASB for transcription factors
- SMAD3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMAD3_HUMAN | 2.83 | -2.17 | 1.00 | 2.04 | Discordant |
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Motif analysis
