rs17078173 chr3:45665245 G>A
- Sequence
ggtcacaatggtcctggagcatat[G/A]tccaaggtgactgtcataaatgcc
- ASB in cell types
- adult erythroblasts GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- KDM6A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM6A_HUMAN | 2.20 | n/a | 2.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Brain_Amygdala, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Left_Ventricle, Testis, Thyroid, Whole_Blood