rs17078689 chr3:46187087 A>G

Sequence
cttgaacttctgcaattttgcaaa[A/G]acacatatacaaaatttaaattat
ASB in cell types
germinal center B-cells
ASB for transcription factors
BCL6_HUMAN MEF2B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BCL6_HUMAN 2.73 0.42 1.4·10-30.87 1.75 n/a No Hit
MEF2B_HUMAN 2.09 n/a 0.031.00 3.00 0.56 Weak Discordant
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Motif analysis

MEF2B_HUMAN Weak Discordant
MEF2B_HUMAN pic

Genetic associations

GTEx eQTL Esophagus_Muscularis

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