rs17083088 chr4:53582407 C>T

Sequence
caggtctcacaaaagatcacaaaa[C/T]gaccggatcctgtaagagctttgt
ASB in cell types
HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.07 -0.79 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP abnormal involuntary movement scale,  chronic kidney disease,  diastolic blood pressure (dbp),  ldl cholesterol change with statins
GTEx eQTL Artery_Aorta,  Brain_Cerebellum,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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