rs17089645 chr13:72645733 C>T

Sequence
ttcagctcccatgactgccacctc[C/T]gccccttttcacttcactttttca
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 3.12 -1.37 7.2·10-51.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) body mass index (bmi) fasting blood glucose hdl cholesterol systolic blood pressure (sbp) total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts Nerve_Tibial Skin_Sun_Exposed_Lower_leg Thyroid

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