rs17091526 chr14:56482471 C>T
- Sequence
aagaaatggtgccctctgcagttg[C/T]gtaacaaaacaacaccagctcccc
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) neural cell
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.50 | 0.03 | 1.22 | 0.00 | Weak Discordant | |||
| STAG1_HUMAN | 2.02 | 0.51 | 1.05 | n/a | n/a |
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Motif analysis
