rs17092618 chr10:114938201 G>C
- Sequence
gagggtcctgtcaggcgcactctt[G/C]ttgcatcatcagcgtgcacctcca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes 22RV1 (prostate carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- STAT1_HUMAN FOXK2_HUMAN ANDR_HUMAN KMT2B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.74 | -4.97 | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.61 | 0.52 | 1.25 | n/a | No Hit | |||
| ANDR_HUMAN | 3.01 | n/a | 2.00 | n/a | No Hit | |||
| KMT2B_HUMAN | 1.92 | -1.71 | 1.00 | n/a | No Hit |
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