rs17097336 chr14:60332035 T>C

Sequence
gcatcgctcgttggcatcttgagg[T/C]tcactactcaaggtgggctttgaa
ASB in cell types
RWPE2 tibial nerve
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.45 0.79 1.003.0·10-9 1.26 0.42 Weak Concordant
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

GRASP diastolic blood pressure (dbp),  fasting insulin,  height,  homa-ir,  systolic blood pressure (sbp),  waist hip ratio,  years of education
GTEx eQTL Adipose_Subcutaneous,  Brain_Caudate_basal_ganglia,  Cells_Cultured_fibroblasts,  Testis

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