rs17097413 chr5:141651540 T>C
- Sequence
ggggccaccgagaaactaaacctg[T/C]tactgctgcgaatacgccggcagg
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor primary B-CLL cells
- ASB for transcription factors
- ANDR_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.90 | n/a | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.48 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Thyroid