rs17106304 chr14:68793794 C>G
- Sequence
cagcggggcgtagggtggggcgcg[C/G]tgctggggggactagggaaacttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) primary B-CLL cells naive IgD+ B cells GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN TBX21_HUMAN ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.49 | 0.24 | 1.10 | -3.54 | Concordant | |||
| TBX21_HUMAN | n/a | 2.19 | 1.00 | n/a | No Hit | |||
| ELF1_HUMAN | 2.30 | -1.98 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
