rs17113184 chr14:27911783 A>C
- Sequence
gaaagtcaacacattcatcaaatt[A/C]ttgtacaaccaaaggctgggtcaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.04 | 1.77 | 1.69 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.08 | 1.59 | 1.72 | 0.25 | Weak Concordant | |||
| EP300_HUMAN | -4.37 | 2.47 | 1.50 | n/a | n/a |
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Motif analysis
