rs17114397 chr10:102152246 C>G
- Sequence
accggaaagagtttatagatttcc[C/G]gtctaccctacctctgaggtgaag
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) 22RV1 (prostate carcinoma) HCT-116 (colon carcinoma)
- ASB for transcription factors
- TCF21_HUMAN GABPA_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 2.06 | n/a | 2.50 | n/a | No Hit | |||
| GABPA_HUMAN | -3.60 | 2.40 | 1.33 | 4.20 | Concordant | |||
| ANDR_HUMAN | 3.34 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
