rs17115409 chr5:153932562 A>C
- Sequence
aagcctttccagagggtggtattg[A/C]tgtacatttccatactatcatgta
- ASB in cell types
- MSC (mesenchymal stem cells)
- ASB for transcription factors
- CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | -1.23 | 1.87 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), aortic valve calcium, body mass index (bmi), fasting blood glucose, hdl cholesterol, urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Muscle_Skeletal, Whole_Blood