rs17116304 chr5:154647460 G>A
- Sequence
tggactttagactcagacgaccgc[G/A]ctcttaaaccttagatgacctcat
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NCOR1_HUMAN ZEB2_HUMAN NRF1_HUMAN HDAC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOR1_HUMAN | -2.88 | 2.23 | 2.00 | n/a | n/a | |||
| ZEB2_HUMAN | -3.59 | 1.94 | 2.00 | n/a | No Hit | |||
| NRF1_HUMAN | -3.69 | 1.83 | 2.00 | n/a | No Hit | |||
| HDAC3_HUMAN | n/a | 3.40 | 2.00 | n/a | n/a | |||
| ATF3_HUMAN | n/a | 1.65 | 2.00 | n/a | No Hit |
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